Scott,
I've built no less than 5 exhausts off A1 sidewinders. There's nothing magic about what Tiger does from the collector back-- but what your shop will find is that there are precious few places to actually put a muffler besides where Tiger does. His muffler is pretty nice as well.
As Jusin implied: exhaust tuning is a bit of a science. I've read a fair bit about it, and there are charts which give you ideal lengths, etc., but they kind've go out the window with the narrow collector Tiger puts on the header. This is deliberate, and so that you can do pretty much what you want after the header.
FWIW, the tube lengths on the sidewinder vary up to 6". It's harsh, but it is what it is- nothing is perfect. Anybody's Merge header is true equal-length, and the tubes are the right length for your engine-- but the collector points straight back. If you want a true equal-length sidewinder, CSPs Python is.... for about 3x the money. I've done a merge exhaust with "perfect" primaries, and I couldn't tell any difference on the dyno or the street.
For a DTM, the slip-on system would work great, and it's a lot less money. The only reason to do the flanged J-pipes is so you can run sled tins and a thermostat. You aren't going to do that, so the non-flanged (slip-on) set-up is actually better.
With the exhausts I've done, one option I've tried which worked well (until I changed some things that made it impossible) was to wrap the exhaust completely around the engine and put 2 mufflers in series, one beside each valve-cover. The sound is perfect- the length is pretty important in "mellowing" the tone, but keeping it on a bark when hammered. Short glasspacks would be fine- there's two of them in series after all- and you can do the center exit thing all the kids like so much. If you do this, it's pretty easy to keep the collector as the lowest point on the system. I'd go ahead a grind the rear valance to bring the pipe out just under the bumper, and keep it high enough to not drag on every single driveway.
Good luck. You'll spend more than you thought possible. If you can live with it, Tiger's set-up really is the most economical way to go.